A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

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i1 - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
i2 - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
i3 - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
ibkey - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
ICON_PREFIX - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
ICON_SUFFIX - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
iconMinus - Variable in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
iconPlus - Variable in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow
 
icur - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
id - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.PlaybackThread
 
id - Variable in class at.tuwien.ifs.somtoolbox.audio.PlaybackThread
 
id - Variable in class at.tuwien.ifs.somtoolbox.data.metadata.EmtpyVectorMetaData
 
id - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.InputVectorSelectorPane
 
id - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.RunResultSpecifierPane
 
iDecodedcount - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
 
identifier - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
idir - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
iedge - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
iflag - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
ii - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
ii_pause - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame
 
ii_play - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame
 
ii_stop - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ControlFrame
 
iIndex - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.FindMeLoopThread
 
ij - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
IMAGE - Static variable in class at.tuwien.ifs.feature.ContentType
 
imageDataNode - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Holds the images associated with the mapped input vectors
imageMap - Variable in class at.tuwien.ifs.somtoolbox.apps.server.HTMLMapInformation
 
imagePath - Variable in class at.tuwien.ifs.somtoolbox.apps.server.HTMLMapInformation
 
imagePath - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.output.OutputReportHtml
 
imagePathBase - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
imagePathTemp - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
imagePrefix - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
imageSuffix - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
ImageUtils - Class in at.tuwien.ifs.somtoolbox.util
This class provides methods to manipulate images.
ImageUtils() - Constructor for class at.tuwien.ifs.somtoolbox.util.ImageUtils
 
ImageUtils.Origin - Enum in at.tuwien.ifs.somtoolbox.util
 
ImageUtils.Origin() - Constructor for enum at.tuwien.ifs.somtoolbox.util.ImageUtils.Origin
 
IMG - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.httphandler.PocketSOMConfigProvider
 
imgDir - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionHTML
the directory to which the created images shall be saved
imgDir - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionLATEX
the directory to which the created images shall be saved
imgDir - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
 
imgSubdir - Static variable in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionHTML
the name of the directory where the image shall be saved - relative to the given baseDir path in the constructor
imgSubdir - Static variable in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionLATEX
the name of the directory where the image shall be saved - relative to the given baseDir path in the constructor
improve() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Tour
try to find another path with shorter length using removals of points j and inserting i,j,i+1
improvecross() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Tour
improve the path locally, using replacements of i,i+1 and j,j+1 with i,j and i+1,j+1
incCount(T) - Method in class at.tuwien.ifs.somtoolbox.util.ElementCounter
 
includeAdditionalVisualizations() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.output.SOMDescriptionHTML
 
includeClusterReport - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeClusterReport() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeDistortion - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeDistPic() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeFlowBorderLine - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeFlowBorderLinePic() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeRegionReport - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeRegionReport() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeSDH - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeSDHVisualization() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeSemanticReport - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeSemanticReport() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeTopographicProduct - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeTPVisualization() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeTrustWorthiness - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
includeTWVisualization() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.EditableReportProperties
 
incNumVectors(int) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibTemplateVector
 
incNumVectors(int) - Method in interface at.tuwien.ifs.somtoolbox.data.TemplateVector
Increase the num-vectors counter, used e.g.
increment(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator.LabelledCounterMapToBePutInCOMMONS
increment the counter for the given key
incrementMonitor() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.TreeBuilder
 
incrementOrAdd(String) - Method in class at.tuwien.ifs.somtoolbox.layers.quality.EntropyAndPurityCalculator.LabelledCounterMapToBePutInCOMMONS
increment the counter for the given key this one checks for existence
index - Variable in class at.tuwien.ifs.somtoolbox.data.TemplateVectorElement
 
index - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticClass
 
index - Variable in class at.tuwien.ifs.somtoolbox.structures.ElementWithIndex
 
index - Variable in class at.tuwien.ifs.somtoolbox.util.comparables.ComponentRegionCount
 
Index2DatabaseImporter - Class in at.tuwien.ifs.somtoolbox.database
Reads data from a TeSeTool generated (Lucene-based) index and writes it to a database.
Index2DatabaseImporter(String, String, String, String, String) - Constructor for class at.tuwien.ifs.somtoolbox.database.Index2DatabaseImporter
 
indexGenerator - Variable in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
indexOf(ArrayList<String>, String) - Static method in class at.tuwien.ifs.somtoolbox.util.CollectionUtils
 
indexOfStartsWithAny(String, String...) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
Checks whether the given String starts with any of the given options.
indexOfStartsWithAny(String, String, String...) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
Checks whether the given String starts with any of the given options concatenated by the suffix.
INDICATOR_COMPONENTS - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMPAKInputData
 
indices - Variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.Cluster
 
Indices2D - Class in at.tuwien.ifs.somtoolbox.util
 
Indices2D(int, int) - Constructor for class at.tuwien.ifs.somtoolbox.util.Indices2D
 
Indices2D(int, int, int, int) - Constructor for class at.tuwien.ifs.somtoolbox.util.Indices2D
 
info(String) - Method in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
INFO - Static variable in interface at.tuwien.ifs.somtoolbox.apps.SOMToolboxApp
Information about the project.
info - Variable in class at.tuwien.ifs.somtoolbox.util.PCA
 
INFO_TEXT - Static variable in interface at.tuwien.ifs.somtoolbox.apps.SOMToolboxApp
 
informListeners(String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.ConnectorEndpoint
 
informListenersStart(int, AudioVectorMetaData) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.AudioPlayer
 
informListenersStop(int, AudioVectorMetaData) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.AudioPlayer
 
informPlayListListeners() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
INFTY - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AutoRoutePanel.SimpleTSPSolver.Graph
 
init() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
init(PlaylistAnalysis) - Method in interface at.tuwien.ifs.somtoolbox.apps.analysis.PLAnalyser
Initialize the Analyzer.
init(PlaylistAnalysis) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLClusterSpaceAnalyser
 
init(PlaylistAnalysis) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLInputSpaceAnalyser
 
init(PlaylistAnalysis) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLOutputSpaceAnalyser
 
init(PlaylistAnalysis) - Method in class at.tuwien.ifs.somtoolbox.apps.analysis.PLStepSequenceAnalyser
 
init() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClusteringControl
 
init() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GenericPNodeScrollPane
 
init() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.LineSelectionEventHandler
 
init() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.OrderedPSelectionEventHandler
 
init(JFrame, SOMLibFormatInputReader, CommonSOMViewerStateData, GrowingLayer, boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
init() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
init(List<E>) - Method in class at.tuwien.ifs.somtoolbox.clustering.WardClustering
 
init(boolean, boolean, long) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
init(String) - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
init(double[][]) - Method in class at.tuwien.ifs.somtoolbox.layers.metrics.MahalanobisMetric
 
init(boolean, ReportGenerator) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
INIT_INTERVAL_INTERPOLATE - Static variable in class at.tuwien.ifs.somtoolbox.layers.Unit
 
INIT_PCA - Static variable in class at.tuwien.ifs.somtoolbox.layers.Unit
 
INIT_RANDOM - Static variable in class at.tuwien.ifs.somtoolbox.layers.Unit
 
INIT_VECTOR - Static variable in class at.tuwien.ifs.somtoolbox.layers.Unit
 
initButtonLoad() - Method in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
initButtonLoadClassInfo() - Method in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
initButtonSaveResults() - Method in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
initButtonStart() - Method in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
initClassPieCharts(Unit, SOMLibClassInformation, double, double) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
initClassTable() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClassLegendPane
 
initClustersEqualNumbers(DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
cluster centres are initialised by equally sized random chunks of the input data when there's 150 instances, we assign 50 chosen randomly to each cluster and calculate its centre from these (the last cluster might be larger if numInstances mod k < 0)
initClustersLinearly(DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
This one does linear initialisation.
initClustersLinearlyOnInstances(DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
like KMeans.initClustersLinearly(DistanceMetric), but after computing the exact linear point, rather finds & uses the closest instance from the data set as centroid.
initClustersRandomly(DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Calculate random centroids for each cluster.
initClustersRandomlyOnInstances(DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Take random points from the input data as centroids.
initColumnSizes() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ColourLegendTable
Deprecated.  
initComponents() - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer.ClassVisControlPanel
This method is called from within the constructor to initialize the form.
initContent() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
initCPURanges() - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
initCurrentVisualisation() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
initDashPatterns() - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
initData(int, int, double, int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
Initializes textual details
initDataStructures(boolean) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
initDetails() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
Initializes the details node.
initDetails(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
initDistanceMatrix(DistanceMetric) - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Calculates the AbstractSOMLibSparseInputData.distanceMatrix - careful, this is a lengthy process and should be done only if needed.
initDistances() - Method in class at.tuwien.ifs.somtoolbox.layers.MnemonicGrowingLayer
 
initDocumentTermPreparedStatement() - Method in class at.tuwien.ifs.somtoolbox.database.Index2DatabaseImporter
 
initDocViewer(AbstractSelectionPanel) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
initFileChooser() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClassLegendPane
 
initFileChooser(JFileChooser, FileFilter) - Static method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.ExportUtils
 
initFrame() - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MnemonicSOMGenerator
 
initFrom - Static variable in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
initFromExistingData(DoubleMatrix2D, String[], boolean, Random, TemplateVector, SOMLibClassInformation) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
initFromFile(String) - Static method in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
Factory method that reads and creates an InputVectorDistanceMatrix from the given file.
initGui() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.DocSOMPanel
 
initGUI(String, String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPatternsVisWindow
 
initGUIElements() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ComparisonPanel
 
initGUIElements() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
Initializes the GUI elements.
initGUIElements() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaySOMPanel
creates the GUI elements of the Panel (a few JButtons and the JList)
initGUIElements() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
initGUIElements(ComparisonVisualizer) - Method in class at.tuwien.ifs.somtoolbox.visualization.ComparisonVisualizer.ComparisonControlPanel
 
INITIAL_BORDER_WIDTH_MAGNIFICATION_FACTOR - Static variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusteringTree
 
initialHeight - Static variable in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
initialised - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLClusterSpaceAnalyser
 
initialised - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLInputSpaceAnalyser
 
initialised - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLOutputSpaceAnalyser
 
initialised - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLStepSequenceAnalyser
 
initialiseList(String[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractItemVisualizer.AbstractSelectedItemVisualizerControlPanel
 
initializationDuration - Static variable in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
duration of initialization in ms
initialize() - Method in class at.tuwien.ifs.commons.gui.jsap.FileEditor
 
initialize(Class<? extends SOMToolboxApp>, String[]) - Method in class at.tuwien.ifs.commons.gui.jsap.GenericGUI
Build and initialize the GUI
initialize() - Method in class at.tuwien.ifs.commons.gui.SOMToolboxAppChooser
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.PaletteEditor
This method initializes this
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.GHSOMSettingsPanel
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.GrowingSOMSettingsPanel
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.MnemonicSOMSettingsPanel
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.trainer.SOMTrainer
This method initializes this
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.UnitFileViewer
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayerControl
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.StandalonePlaySOMPlayer
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaygroundPanel
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PlaylistEvaluationPane
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector
 
initialize() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.TuxRacerExportDialog
 
initialize() - Method in interface at.tuwien.ifs.somtoolbox.layers.initialisation.LayerInitializer
Initialize the SOM Layer
initialize() - Method in class at.tuwien.ifs.somtoolbox.layers.initialisation.PCAInitializer
Initialize the SOM Layer using Principal Component Analysis
initialize() - Method in class at.tuwien.ifs.somtoolbox.layers.initialisation.RandomInitializer
Initialize the SOM Layer randomly
initialize() - Method in class at.tuwien.ifs.somtoolbox.layers.initialisation.RandomSamplingInitializer
Initialize the SOM Layer using Random Input Sampling
initialize() - Method in class at.tuwien.ifs.somtoolbox.layers.initialisation.SOMInitializer
 
initializeGridwithClasses(boolean) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.SemanticInterpreterGrid
Creates all the Info needed for Report
initializeMarquee(PInputEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.LineSelectionEventHandler
 
initialSetup() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractViewerControl
 
initialSize - Variable in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
 
initialTitle - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.VisualizationControl
 
initialTriangle - Variable in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.RegionManager
 
initialVisualisation - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
initialVisualisationVariant - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
initialWidth - Static variable in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
initInputLocations(Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
Computes the locations of each input vector within a specific unit
initLabels(int, int, int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
Initializes text labels for this node.
initLayer(boolean, SOMProperties, InputData) - Method in class at.tuwien.ifs.somtoolbox.models.GrowingSOM
 
initLegendTableAfterAggregation(List<? extends Cluster<ComponentLine2D>>) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer.MetroMapControlPanel
 
initLegendTableAfterSelection(List<ComponentRegionCount>) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer.MetroMapControlPanel
 
initLegendTableNormal() - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer.MetroMapControlPanel
 
initMap(int, int, Palette) - Method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
initMatlabPalette() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
this palette is the MATLAB jet colormap it consists of 6 fixed color values which are interpolated through 64 values
initMatrix(boolean) - Method in class at.tuwien.ifs.somtoolbox.apps.helper.VectorFileToRandomAccessFileConverter
 
initMatrix(boolean) - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
initMinAndMaxValues() - Method in class at.tuwien.ifs.somtoolbox.input.SecondLifeInputFileReader
 
initMinAndMaxValues() - Method in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
Utility method to get the min, max, and diff values of the data set.
initNeighbourhoodLookup(GrowingSOM) - Method in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
initNoClassInfo() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClassLegendPane
 
initNoShiftsInfo() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
initPaint() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.RhythmPattern
 
initPaintList() - Method in class at.tuwien.ifs.somtoolbox.data.SOMLibClassInformation
Initialise a standard paint list
initPalettes() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
initPanelRetrieval() - Method in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
initPlot() - Method in class at.tuwien.ifs.somtoolbox.apps.DataSetViewer
 
initPNodeProperties(double, double) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
Initializes common properties for unit PNodes and empty PNodes
initPNodeSpecific() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GenericPNodeScrollPane
 
initPredefinedPalettes() - Static method in class at.tuwien.ifs.somtoolbox.visualization.Palettes
 
initProgressBar(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.LoggingHandler
 
initProgressBar(int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.StatusBar
 
initSelectionHandlers() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GenericPNodeScrollPane
initialize both selection handlers and set rectangle selection as default.
initSelectionHandlers() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
initialize both selection handlers and set rectangle selection as default.
initSmoothingCache(GrowingSOM) - Method in class at.tuwien.ifs.somtoolbox.visualization.SmoothedDataHistograms
 
initStorage() - Method in class at.tuwien.ifs.somtoolbox.data.distance.AbstractMemoryInputVectorDistanceMatrix
 
initStorage() - Method in class at.tuwien.ifs.somtoolbox.data.distance.FullMemoryInputVectorDistanceMatrix
 
initStorage() - Method in class at.tuwien.ifs.somtoolbox.data.distance.LeightWeightMemoryInputVectorDistanceMatrix
 
initSuperUnit(int, Unit) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
initTitle() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
initToroid() - Method in class at.tuwien.ifs.somtoolbox.layers.ToroidLayer
 
initType - Variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeansTreeBuilder
 
initUnitInformation() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
initVisualizationMatrices(GrowingSOM, int, int) - Method in class at.tuwien.ifs.somtoolbox.visualization.RhythmPatternsAttributeVisualizer
 
initVisualizations(SharedSOMVisualisationData, SOMInputReader, int, Palette, Palette[]) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
 
initVisualizations(SharedSOMVisualisationData, SOMInputReader, MapPNode) - Static method in class at.tuwien.ifs.somtoolbox.visualization.Visualizations
Initialises all registered visualisation - sets the SharedSOMVisualisationData input objects, the MapPNode map, and default palettes.
initWeightVectorBySample(InputDatum) - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
Sets this unit's weight vector to the vector of the input datum specified by argument datum.
initWindowClosing() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
handles the window closing to dispose of a docviewer frame, if present, and not to do EXIT on close, but dispose.
If running standalone, the JVM will exit automatically after disposing the last frame, but if called from another application, this will only dispose this window, not exit the JVM.
initxsize - Variable in class at.tuwien.ifs.somtoolbox.layers.initialisation.SOMInitializer
 
initysize - Variable in class at.tuwien.ifs.somtoolbox.layers.initialisation.SOMInitializer
 
initzsize - Variable in class at.tuwien.ifs.somtoolbox.layers.initialisation.SOMInitializer
 
innerRadius - Variable in class at.tuwien.ifs.somtoolbox.output.labeling.LagusKeywordLabeler
 
innerRadius - Variable in class at.tuwien.ifs.somtoolbox.visualization.MetroMapVisualizer
 
input - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ComponentPlaneClusteringFrame
 
input - Variable in class at.tuwien.ifs.somtoolbox.util.comparables.InputDistance
 
INPUT_CORRECTIONS - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
INPUT_FILE_FORMAT_TYPES - Static variable in class at.tuwien.ifs.somtoolbox.data.InputDataFactory
Supported Input File Format Types
INPUT_VECTOR - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
INPUT_VECTOR_DISTANCE_MATRIX - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMVisualisationData
 
INPUT_VECTOR_FILE_FORMAT_CORRUPT_MESSAGE - Static variable in class at.tuwien.ifs.somtoolbox.data.SOMLibSparseInputData
 
inputClasses - Static variable in class at.tuwien.ifs.somtoolbox.data.InputDataFactory
 
InputContainer - Class in at.tuwien.ifs.somtoolbox.layers
Base container for input data mapped onto units.
InputContainer() - Constructor for class at.tuwien.ifs.somtoolbox.layers.InputContainer
Default Constructor.
InputCorrections - Class in at.tuwien.ifs.somtoolbox.input
 
InputCorrections() - Constructor for class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
InputCorrections(String, Layer, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.input.InputCorrections
 
InputCorrections.CreationType - Enum in at.tuwien.ifs.somtoolbox.input
Type how input corrections where created.
InputCorrections.CreationType() - Constructor for enum at.tuwien.ifs.somtoolbox.input.InputCorrections.CreationType
 
InputCorrections.InputCorrection - Class in at.tuwien.ifs.somtoolbox.input
 
InputCorrections.InputCorrection(Unit, Unit, String, double, InputCorrections.CreationType) - Constructor for class at.tuwien.ifs.somtoolbox.input.InputCorrections.InputCorrection
 
inputCorrectionsPNode - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
inputd - Variable in class at.tuwien.ifs.somtoolbox.summarisation.methods.TFxIDF
 
inputData - Variable in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI
 
inputData - Variable in class at.tuwien.ifs.feature.evaluation.SimilarityRetrievalGUI.InputDataRadioButton
 
inputData - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PlaylistAnalysis
 
inputData - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLInputSpaceAnalyser
 
inputData - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLStepSequenceAnalyser
 
inputData - Static variable in class at.tuwien.ifs.somtoolbox.apps.initEval.Measure
 
InputData - Interface in at.tuwien.ifs.somtoolbox.data
The InputData provides the input vectors to be used for the training process of a Self-Organizing Map.
inputData - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
 
inputData - Variable in class at.tuwien.ifs.somtoolbox.visualization.ActivityHistogram
 
inputData - Variable in class at.tuwien.ifs.somtoolbox.visualization.NeighbourhoodGraph
 
InputDataFactory - Class in at.tuwien.ifs.somtoolbox.data
A factory class that knows how to build a InputData object from a given file name
InputDataFactory() - Constructor for class at.tuwien.ifs.somtoolbox.data.InputDataFactory
 
InputDataFileFormatConverter - Class in at.tuwien.ifs.somtoolbox.data
This class converts between various file formats for InputData.
InputDataFileFormatConverter() - Constructor for class at.tuwien.ifs.somtoolbox.data.InputDataFileFormatConverter
 
inputDataFilename - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
 
InputdataGraph - Class in at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree
 
InputdataGraph(GrowingSOM) - Constructor for class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.InputdataGraph
 
inputDataObjects - Variable in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
inputDataObjects - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
inputDataObjects - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.DocViewPanel
 
InputDataWriter - Class in at.tuwien.ifs.somtoolbox.data
This class gathers methods to write certain InputData, TemplateVector and SOMLibClassInformation in a certain number of file formats, such as SOMLib, WEKA ARFF, SOMPak and ESOM.
InputDataWriter() - Constructor for class at.tuwien.ifs.somtoolbox.data.InputDataWriter
 
InputDatum - Class in at.tuwien.ifs.somtoolbox.data
Class representing a specific input datum.
InputDatum(String, DoubleMatrix1D) - Constructor for class at.tuwien.ifs.somtoolbox.data.InputDatum
Constructs a new InputDatum.
InputDatum(String, double[]) - Constructor for class at.tuwien.ifs.somtoolbox.data.InputDatum
Constructs a new InputDatum.
InputDatum(String, DoubleMatrix1D, int) - Constructor for class at.tuwien.ifs.somtoolbox.data.InputDatum
 
inputDirectory - Static variable in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
InputDistance - Class in at.tuwien.ifs.somtoolbox.util.comparables
This class can be used to compare two InputDatum objects by their distance.
InputDistance(double, InputDatum) - Constructor for class at.tuwien.ifs.somtoolbox.util.comparables.InputDistance
 
inputDistances - Variable in class at.tuwien.ifs.somtoolbox.layers.InputContainer
 
inputDistances - Variable in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
 
inputDistances - Variable in class at.tuwien.ifs.somtoolbox.layers.quality.Trustworthiness_NeighborhoodPreservation
 
inputDragHandler - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
inputElements - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
inputElementSelectionScroller - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
inputElementSelectionScrollerContent - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.ReportGenWindow
 
inputFile - Variable in class at.tuwien.ifs.somtoolbox.data.RandomAccessFileSOMLibInputData
 
inputFileNameSuffix - Static variable in interface at.tuwien.ifs.somtoolbox.data.InputData
 
inputLabels - Variable in class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
 
inputLinkagePath - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
InputNameDistance - Class in at.tuwien.ifs.somtoolbox.util.comparables
This class can be used to compare two input names by their distance.
InputNameDistance(double, String) - Constructor for class at.tuwien.ifs.somtoolbox.util.comparables.InputNameDistance
 
inputNames - Variable in class at.tuwien.ifs.somtoolbox.layers.InputContainer
 
inputNames - Variable in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
 
inputObject - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.ClearButtonActionListener
 
inputObject - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.LoadButtonActionListener
 
inputObject - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SharedSOMVisualisationDataDialog.ReloadButtonActionListener
 
inputObjects - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
inputObjects - Variable in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
 
InputPNode - Class in at.tuwien.ifs.somtoolbox.apps.viewer
Representation of an input object on the map
InputPNode() - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.InputPNode
Default constructor
InputPNode(double, double) - Constructor for class at.tuwien.ifs.somtoolbox.apps.viewer.InputPNode
Initializes this node with the given x, y position
InputQEContainer - Class in at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers
 
InputQEContainer() - Constructor for class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
 
inputReader - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.TestRunResult
 
inputs - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.InputQEContainer
 
inputTemplate - Variable in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
 
inputVector - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ExportDialog
 
inputVector - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer.UpdaterThread
 
inputVector - Variable in class at.tuwien.ifs.somtoolbox.summarisation.methods.TFxIDF
 
InputVectorDistanceMatrix - Class in at.tuwien.ifs.somtoolbox.data.distance
Base for classes providing a distance matrix of the input vectors, with generic methods and fields.
A distance matrix is of size n*n, where n is the number of input vectors.
InputVectorDistanceMatrix() - Constructor for class at.tuwien.ifs.somtoolbox.data.distance.InputVectorDistanceMatrix
 
inputVectorFileName - Variable in class at.tuwien.ifs.somtoolbox.apps.server.ServerSOM
 
inputVectorFileName - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMViewer
 
inputvectors - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
inputvectors - Variable in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
InputVectorSelectorPane - Class in at.tuwien.ifs.somtoolbox.reportgenerator.gui
 
InputVectorSelectorPane(int, String, InputDatum) - Constructor for class at.tuwien.ifs.somtoolbox.reportgenerator.gui.InputVectorSelectorPane
 
inS - Variable in class at.tuwien.ifs.somtoolbox.apps.analysis.PLStepSequenceAnalyser
 
insert(int, Object) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMConfigurationProfile
 
insert(int, int, Object) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMConfigurationProfile
 
insert(Node, Node, double) - Method in class at.tuwien.ifs.somtoolbox.visualization.minimumSpanningTree.Graph
 
insertColor(int, Color) - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
insertColumn(int, String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.StatusBar
 
insertColumn(int, String) - Method in interface at.tuwien.ifs.somtoolbox.util.ProgressListener
 
insertColumn(int, String) - Method in class at.tuwien.ifs.somtoolbox.util.StdErrProgressWriter
 
insertGradientPoint(int, Color) - Method in class at.tuwien.ifs.somtoolbox.visualization.ColorGradient
 
insertRow(int, String) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.StatusBar
 
insertRow(int, String) - Method in interface at.tuwien.ifs.somtoolbox.util.ProgressListener
 
insertRow(int, String) - Method in class at.tuwien.ifs.somtoolbox.util.StdErrProgressWriter
 
insertRowColumn(Unit, Unit, ProgressListener) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
Inserts a row or column of units between units specified by argument a and b.
insertUpdate(DocumentEvent) - Method in class at.tuwien.ifs.commons.gui.util.DocumentAdapter
 
installUI(JComponent) - Method in class at.tuwien.ifs.somtoolbox.util.MultiLineToolTipUI
 
instance - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.CommonSOMViewerStateData
 
instancesInClusters - Variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.KMeans
 
instantiate(String) - Static method in class at.tuwien.ifs.somtoolbox.layers.metrics.AbstractMetric
Instantiates a certain distance metric class specified by argument mName.
Note: for backwards compatibility, if the metric name contains the package prefix at.ec3.somtoolbox, this will be replaced by at.tuwien.ifs.somtoolbox.
instantiate(String) - Static method in class at.tuwien.ifs.somtoolbox.layers.metrics.AbstractWeightedMetric
 
instantiate(String, Layer, InputData) - Static method in class at.tuwien.ifs.somtoolbox.layers.quality.AbstractQualityMeasure
Instantiates a certain quality measure class specified by argument mqName.
instantiate(String) - Static method in class at.tuwien.ifs.somtoolbox.output.labeling.AbstractLabeler
 
instantiateNice(String) - Static method in class at.tuwien.ifs.somtoolbox.layers.metrics.AbstractMetric
Same as AbstractMetric.instantiate(String), but tries to get the metric with the specified name, and then with the package prefix, and throwing only a SOMToolboxException with the root cause nested.
instantUpdateCheckBox - Variable in class at.tuwien.ifs.somtoolbox.visualization.ClusterConnectionsVisualizer.ClusterConnectionsControlPanel
 
INSTRUCTIONS_HTMLFILENAME - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
 
intarray - Variable in class at.tuwien.ifs.somtoolbox.summarisation.methods.TFxIDF
 
intarray - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
INTEGER_TYPE - Static variable in class at.tuwien.ifs.somtoolbox.data.ARFFFormatInputData
 
IntegerEditor - Class in at.tuwien.ifs.commons.gui.jsap
 
IntegerEditor(Option) - Constructor for class at.tuwien.ifs.commons.gui.jsap.IntegerEditor
 
integerFields - Static variable in class at.tuwien.ifs.somtoolbox.input.SOMLibMapDescription
 
integerFields - Static variable in class at.tuwien.ifs.somtoolbox.reportgenerator.MySOMLibMapDescription
 
interactionMapCache - Variable in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
interleave(String[], String) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
interleave(double[], String) - Static method in class at.tuwien.ifs.somtoolbox.util.StringUtils
 
internalFrameActivated(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
internalFrameClosed(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
internalFrameClosing(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
internalFrameDeactivated(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
internalFrameDeiconified(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
internalFrameIconified(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
internalFrameOpened(InternalFrameEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMFrame
 
interpolate - Variable in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
interpolateCheckbox - Variable in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer.VisualizationControlPanel
 
interrupt() - Method in class at.tuwien.ifs.somtoolbox.util.SwingWorker
A new method that interrupts the worker thread.
interruptEvery - Variable in class at.tuwien.ifs.somtoolbox.apps.SDHTrainingSequenceGenerator
 
interruptEvery - Variable in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
interruptionOccurred(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.SDHTrainingSequenceGenerator
 
interruptionOccurred(int, int) - Method in interface at.tuwien.ifs.somtoolbox.layers.TrainingInterruptionListener
Is called when an interruption of the training process occurs.
interruptionOccurred(int, int) - Method in class at.tuwien.ifs.somtoolbox.models.GrowingSOM.IntermediateSOMDumper
 
intersect - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 
interval - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel.GarbageCollector
 
intervals - Variable in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
holds the computed results of AbstractSOMLibSparseInputData.getDataIntervals()
INTIAL_BORDER_COLOUR - Static variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
IntrinsicDistance - Class in at.tuwien.ifs.somtoolbox.layers.quality
Implementation of Intrinsic Distance Quality
IntrinsicDistance(Layer, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance
 
IntrinsicDistance.QuadUnitDistance - Class in at.tuwien.ifs.somtoolbox.layers.quality
 
IntrinsicDistance.QuadUnitDistance() - Constructor for class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.QuadUnitDistance
 
IntrinsicDistance.UnitInfo - Class in at.tuwien.ifs.somtoolbox.layers.quality
 
IntrinsicDistance.UnitInfo(Unit) - Constructor for class at.tuwien.ifs.somtoolbox.layers.quality.IntrinsicDistance.UnitInfo
 
IntrinsicDistanceVisualizer - Class in at.tuwien.ifs.somtoolbox.visualization
Visualisation of some aspects of the Intrinsic Distance Quality Measure, computation in IntrinsicDistance.
IntrinsicDistanceVisualizer() - Constructor for class at.tuwien.ifs.somtoolbox.visualization.IntrinsicDistanceVisualizer
 
invalidateCache(String) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractBackgroundImageVisualizer
Deletes all cached elements from the given visualisation.
invalidateCache(Palette) - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
Deletes all cached elements that use the Palette with the given index.
invalidateCache() - Method in class at.tuwien.ifs.somtoolbox.visualization.ThematicClassMapVisualizer
Deletes all cached elements from this visualisation.
InvalidData() - Method in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
sets the first two components of the contour value array to equal values, thus preventing subsequent drawing of the contour plot.
invCenterReduce(double[]) - Method in class at.tuwien.ifs.somtoolbox.util.PCA
 
invCenterReduce(double[][]) - Method in class at.tuwien.ifs.somtoolbox.util.PCA
 
InverseComparator<T extends Comparable<T>> - Class in at.tuwien.ifs.somtoolbox.util
 
InverseComparator() - Constructor for class at.tuwien.ifs.somtoolbox.util.InverseComparator
 
inversion - Variable in class at.tuwien.ifs.somtoolbox.layers.quality.InversionMeasure
 
InversionMeasure - Class in at.tuwien.ifs.somtoolbox.layers.quality
Implementation of SOM Inversion Measure for multidimenional Inputdata.
InversionMeasure(Layer, InputData) - Constructor for class at.tuwien.ifs.somtoolbox.layers.quality.InversionMeasure
 
invertNode(int, int) - Method in class at.tuwien.ifs.somtoolbox.util.mnemonic.MapPanel
 
invokeMainClass(ArrayList<Class<? extends SOMToolboxApp>>, String, String[], boolean) - Static method in class at.tuwien.ifs.somtoolbox.apps.SOMToolboxMain
 
is01(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns whether the values in the given dimension are all only 0 or 1
is3D - Variable in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
is3D() - Method in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
is3Dcached - Variable in class at.tuwien.ifs.somtoolbox.input.SOMLibDataWinnerMapping
 
isAbsolute() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
isAllSelected() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
isAnimated() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
isAudio() - Method in class at.tuwien.ifs.feature.ContentType
 
isAudioSOM - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.ExportDialog
 
isAutoOrientation() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
Returns wheter the Components orientation is automatically adjusted.
isBackgroundImageVisible() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.MapPNode
 
isBordered - Variable in class at.tuwien.ifs.commons.gui.controls.swing.table.ColorCellRenderer
 
isCancelled - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer.SearchThread
 
isCellEditable(int, int) - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
isCellEditable(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGrid
this grid is read-only
isCellEditable(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGridModel
 
isCellEditable(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.psomserver.PocketSOMConnector.UserTableModel
 
isCollapsed() - Method in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel
 
isCumulative() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.QuiverPNode
 
isDiscrete(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns whether our heuristic estimates this dimension to contain discrete values This is the case, if all values in this dimension are exact integer values.
isDrillDownable(Unit) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
Returns true if the specified unit has an underlying map and is therefore drill-down-able.
isEdgeColumn(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
isEdgeRow(int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
isEmpty() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMConfigurationProfile
 
isExportable(Object[]) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.fileutils.MIMETypes
 
isFileNames() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
isFullFunctional() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractViewerControl
Determines if the control is fully functional (e.g.
isFullFunctional() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ClassLegendPane
 
isHidden() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
Returns true if the palette should not be shown in the Palettes menu.
isImage() - Method in class at.tuwien.ifs.feature.ContentType
 
isInside(Pnt[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
isInterpolate() - Method in class at.tuwien.ifs.somtoolbox.visualization.AbstractMatrixVisualizer
 
isInterpolate() - Method in interface at.tuwien.ifs.somtoolbox.visualization.MatrixVisualizer
 
isLabelled() - Method in class at.tuwien.ifs.somtoolbox.input.AbstractSOMInputReader
 
isLabelled() - Method in interface at.tuwien.ifs.somtoolbox.input.SOMInputReader
Returns whether the SOM is labelled.
isLabelled() - Method in class at.tuwien.ifs.somtoolbox.models.AbstractNetworkModel
 
isLeaf() - Method in class at.tuwien.ifs.somtoolbox.clustering.HierarchicalCluster
 
isMainApp(Class<? extends SOMToolboxApp>) - Static method in class at.tuwien.ifs.somtoolbox.doc.RunnablesReferenceCreator
 
isMapped(String) - Method in class at.tuwien.ifs.somtoolbox.layers.InputContainer
Checks if an input datum with identifier name is mapped onto this container.
isMapped(String) - Method in class at.tuwien.ifs.somtoolbox.layers.MappedInputs
Checks if an input datum with identifier name is contained.
isMarqueeSelection(PInputEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.ClusterSelectionEventHandler
 
isMarqueeSelection(PInputEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.LineSelectionEventHandler
 
isMarqueeSelection(PInputEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.MyRectangleSelectionEventHandler
 
isMultiMatch() - Method in class at.tuwien.ifs.somtoolbox.visualization.comparison.SOMComparison
 
isNormalized - Variable in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
Indicates whether the input data has been normalised.
isNormalized - Variable in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
isNormalized() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
Returns true, if the vectors are normalized to unit length.
isNormalized() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.DatasetInformation
returns whether the input set has been normalized (in fact, this functions returns the result of InputData.isNormalizedToUnitLength())
isNormalizedToUnitLength() - Method in class at.tuwien.ifs.somtoolbox.data.AbstractSOMLibSparseInputData
 
isNormalizedToUnitLength() - Method in interface at.tuwien.ifs.somtoolbox.data.InputData
Indicates whether this data set has been normalised to the unit length.
isNotEmpty(String) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
isNotEmptyNumber(String) - Static method in class at.tuwien.ifs.somtoolbox.apps.server.SOMMap
 
isNullatPos(int) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMConfigurationProfile
 
isNullVector(double...) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
isNullVector(int...) - Static method in class at.tuwien.ifs.somtoolbox.util.VectorTools
 
isOn(Pnt[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
isOnClusterEdge(Unit) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
returns a ArrayList with all classes for witch unit u resembles a Cluster Edge Unit for those classes.
iSongscount - Static variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.Commons
 
isOnMapEdge(Unit) - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.QEContainers.QMContainer
tests whether a unit is on the edge of the map
FIXME: this should go to GrowingLayer
isOptionSelection(PInputEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.handlers.ClusterSelectionEventHandler
 
isOutside(Pnt[]) - Method in class at.tuwien.ifs.somtoolbox.visualization.thematicmap.SOMRegion
 
isPlaying() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.AudioPlayer
 
isPlaying - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
isPlaying() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlayList
 
isPlaying() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.player.PlaySOMPlayer
 
isPlus - Variable in class at.tuwien.ifs.commons.gui.controls.TitledCollapsiblePanel.TitleRow.PlaceholderIcon
 
isReady() - Method in class at.tuwien.ifs.somtoolbox.audio.PlaybackThread
 
isRequired() - Method in class at.tuwien.ifs.commons.gui.jsap.FlaggedOptionControl
 
isRequired() - Method in class at.tuwien.ifs.commons.gui.jsap.ParameterControl
 
isRequired() - Method in class at.tuwien.ifs.commons.gui.jsap.SwitchControl
 
isRequired() - Method in class at.tuwien.ifs.commons.gui.jsap.UnflaggedOptionControl
 
isReversed() - Method in class at.tuwien.ifs.somtoolbox.visualization.Palette
 
isRollUpable(GrowingLayer) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.GHSOMNavigationPanel
Returns true if the current map is a child of a Unit.
isScores() - Method in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
isSelected(int, int) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.multichannelPlayback.ActivityGrid
only the anchor cell should be selected, nothing else (because otherwise it doesn't look pretty anymore
isSelected() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.GeneralUnitPNode
 
isSelected() - Method in class at.tuwien.ifs.somtoolbox.reportgenerator.gui.InputVectorSelectorPane
returns whether this input vector is selected or not
isSelected - Variable in class at.tuwien.ifs.somtoolbox.visualization.clustering.ClusterNode
 
isSelectionAllowed() - Method in class at.tuwien.ifs.commons.gui.controls.swing.table.ClassColorTableModel
 
isShiftArrowsVisibility() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.SOMPane
 
isShowScale() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.PaletteDisplayer
Determines whether a scale is shown or not.
isSparse() - Method in class at.tuwien.ifs.feature.ContentType
 
isText() - Method in class at.tuwien.ifs.feature.ContentType
 
isTopLeftUnit() - Method in class at.tuwien.ifs.somtoolbox.layers.Unit
 
isURL(String) - Static method in class at.tuwien.ifs.somtoolbox.util.FileUtils
Checks whether the given String is a valid URL or not
isUsingDatabase() - Method in class at.tuwien.ifs.somtoolbox.properties.FileProperties
 
isValid() - Method in class at.tuwien.ifs.commons.gui.jsap.FlaggedOptionControl
 
isValid() - Method in class at.tuwien.ifs.commons.gui.jsap.ParameterControl
 
isValid() - Method in class at.tuwien.ifs.commons.gui.jsap.SwitchControl
 
isValid() - Method in class at.tuwien.ifs.commons.gui.jsap.UnflaggedOptionControl
 
isValidOrConfirmed() - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.MultichannelPlaybackPanel
Parses the data in layout table and constructs the array used to create the PlaybackThreads
isValidUnitLocation(Point) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
isValidUnitLocation(int, int) - Method in class at.tuwien.ifs.somtoolbox.layers.GrowingLayer
 
isVisible() - Method in class at.tuwien.ifs.somtoolbox.apps.server.LabelDescription
 
itemCount - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.PieChartPNode
 
itemListener - Variable in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.AbstractSelectionPanel
 
itemNames - Variable in class at.tuwien.ifs.somtoolbox.summarisation.gui.NavigationPanel
 
itemNames - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.DocumentDisplayer
 
itemNames - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.MultiDocumentHandler
 
itemNames - Variable in class at.tuwien.ifs.somtoolbox.summarisation.output.ResultHandler
 
itemNames - Variable in class at.tuwien.ifs.somtoolbox.summarisation.parser.Scorer
 
itemSelected(Object[]) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.DocViewPanel
displays the document with the provided name in the docviewer.
itemSelected(Object[]) - Method in interface at.tuwien.ifs.somtoolbox.apps.viewer.ItemSelectionListener
 
ItemSelectionListener - Interface in at.tuwien.ifs.somtoolbox.apps.viewer
 
itemStateChanged(ItemEvent) - Method in class at.tuwien.ifs.somtoolbox.apps.viewer.controls.ShiftsControlPanel
 
iterator() - Method in class at.tuwien.ifs.somtoolbox.clustering.Cluster
 
iterator() - Method in class at.tuwien.ifs.somtoolbox.data.SharedSOMVisualisationData
 
ix - Variable in class at.tuwien.ifs.somtoolbox.visualization.contourplot.ContourPlot
 

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