Package | Description |
---|---|
at.tuwien.ifs.feature.evaluation | |
at.tuwien.ifs.somtoolbox.apps.helper | |
at.tuwien.ifs.somtoolbox.apps.viewer |
This package implements the SOMViewer application; main class is SOMViewer.java.
|
at.tuwien.ifs.somtoolbox.apps.viewer.fileutils | |
at.tuwien.ifs.somtoolbox.data |
Classes in this package implement reading, storing and providing of different data needed for the SOM, e.g.
|
at.tuwien.ifs.somtoolbox.layers |
Provides the basic classes constituting SOM-based neural networks.
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at.tuwien.ifs.somtoolbox.layers.quality |
Classes in this package implement various quality measures, indicating the quality of the SOM mapping.
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at.tuwien.ifs.somtoolbox.reportgenerator | |
at.tuwien.ifs.somtoolbox.visualization.thematicmap |
Contains helper classes used by the
ThematicClassMapVisualizer . |
Modifier and Type | Field and Description |
---|---|
private SOMLibClassInformation |
SimilarityRetrievalGUI.classInfo |
Modifier and Type | Method and Description |
---|---|
private void |
DataMapper.mapCompleteDataAfterTraining(GrowingSOM som,
InputData data,
SOMLibClassInformation classInfo,
ArrayList<String> mappingExceptions,
String labelerName,
int numLabels) |
Modifier and Type | Field and Description |
---|---|
private SOMLibClassInformation |
MapPNode.classInfo |
private SOMLibClassInformation |
GeneralUnitPNode.classInfo |
Modifier and Type | Method and Description |
---|---|
void |
GeneralUnitPNode.initClassPieCharts(Unit u,
SOMLibClassInformation classInfo,
double width,
double height) |
void |
MapPNode.updateClassInfo(SOMLibClassInformation classInfo) |
Constructor and Description |
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GeneralUnitPNode(Unit u,
CommonSOMViewerStateData state,
SOMLibClassInformation classInfo,
SOMLibDataInformation dataInfo,
double width,
double height) |
GeneralUnitPNode(Unit u,
CommonSOMViewerStateData state,
SOMLibClassInformation classInfo,
SOMLibDataInformation dataInfo,
Point[][] locations,
double width,
double height) |
Modifier and Type | Method and Description |
---|---|
void |
ExportUtils.saveImageMap(GrowingLayer layer,
int unitWidth,
String fullPath,
String baseFileName,
String[][] visualisations,
boolean isAudioSOM,
SOMLibClassInformation classInfo,
Color[] colors,
Properties cleanDataNamesMapping,
String inputDataFilesPrefix,
String outputDataFilesPrefix,
String htmlTemplatesDir,
String imageMapTitle,
boolean generateRhythmPatterns,
boolean forceLinkGeneration) |
Modifier and Type | Class and Description |
---|---|
class |
ESOMClassInformation
Reads a class information file in the ESOM Format (see http://databionic-esom.sourceforge.net/user.html#File_formats)
|
Modifier and Type | Field and Description |
---|---|
protected SOMLibClassInformation |
AbstractSOMLibSparseInputData.classInfo
Any class label information attached to the input vectors.
|
Modifier and Type | Method and Description |
---|---|
SOMLibClassInformation |
InputData.classInformation()
Gets the class info associated with this input data.
|
SOMLibClassInformation |
AbstractSOMLibSparseInputData.classInformation() |
SOMLibClassInformation |
SharedSOMVisualisationData.getClassInfo() |
static SOMLibClassInformation |
SOMLibClassInformation.parse(String contents)
Parses the given contents, which must adhere to the SOMLib format, to a
SOMLibClassInformation object.The difference to the main constructor SOMLibClassInformation(String) is that the constructor reads from
a file, while this method already has the contents in the given parameter. |
Modifier and Type | Method and Description |
---|---|
static AbstractSOMLibSparseInputData |
AbstractSOMLibSparseInputData.create(InputDatum[] inputData,
SOMLibClassInformation classInfo) |
private void |
SOMLibSparseInputData.initFromExistingData(cern.colt.matrix.DoubleMatrix2D data,
String[] dataNames,
boolean norm,
Random rand,
TemplateVector tv,
SOMLibClassInformation clsInfo) |
void |
InputData.setClassInfo(SOMLibClassInformation classInfo) |
void |
AbstractSOMLibSparseInputData.setClassInfo(SOMLibClassInformation classInfo) |
static void |
InputDataWriter.writeAsESOM(SOMLibClassInformation classInfo,
String fileName)
Writes the class information as ESOM
cls file.
|
static void |
InputDataWriter.writeAsSOMLib(InputData data,
TemplateVector templateVector,
SOMLibClassInformation classInformation,
boolean tabSeparatedClassFile,
String basicFileName)
Writes the class information to a file.
|
static void |
InputDataWriter.writeAsSOMLib(InputData data,
TemplateVector templateVector,
SOMLibClassInformation classInformation,
String basicFileName)
Writes the class information to a file.
|
static void |
InputDataWriter.writeAsSOMLib(SOMLibClassInformation classInfo,
String fileName)
Writes the class information to a file in SOMLib format; elements will be sorted by label name.
|
static void |
InputDataWriter.writeToFileTabSeparated(SOMLibClassInformation classInfo,
String fileName)
Writes the class information to a tab-separated file.
|
Constructor and Description |
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AbstractSOMLibSparseInputData(String[] dataNames,
int dim,
boolean norm,
Random rand,
TemplateVector tv,
SOMLibClassInformation clsInfo) |
RandomAccessFileSOMLibInputData(boolean norm,
Random rand,
TemplateVector tv,
SOMLibClassInformation clsInfo,
String fileName) |
SOMLibSparseInputData(cern.colt.matrix.DoubleMatrix2D data,
String[] dataNames,
boolean norm,
Random rand,
TemplateVector tv,
SOMLibClassInformation clsInfo)
Constructor intended for subset generation.
|
SOMLibSparseInputData(InputDatum[] inputData,
SOMLibClassInformation classInfo)
Constructor intended for generated synthetic data.
|
Modifier and Type | Method and Description |
---|---|
private void |
GrowingLayer.trainSpecial(InputData data,
int numIterations,
int startIteration,
SOMProperties trainingProps,
double initialLearnrate,
double initialSigma,
double expParam,
double expParam2,
SOMLibClassInformation classInfo,
double minProbability,
ProgressListener progressWriter) |
Constructor and Description |
---|
EntropyAndPurityCalculator(List<ClusterNode> clusters,
SOMLibClassInformation classInfo) |
Modifier and Type | Field and Description |
---|---|
private SOMLibClassInformation |
DatasetInformation.classInfo |
Modifier and Type | Method and Description |
---|---|
SOMLibClassInformation |
DatasetInformation.getClassInfo() |
Modifier and Type | Field and Description |
---|---|
(package private) SOMLibClassInformation |
SOMRegion.classInfo |
(package private) SOMLibClassInformation |
RegionManager.classInfo |
Constructor and Description |
---|
RegionManager(SOMLibClassInformation classInfo,
ArrayList<Color> paintList,
int width,
int height,
double min_visible_class) |
RegionManager(SOMLibClassInformation classInfo,
ArrayList<Color> paintList,
int width,
int height,
double min_visible_class,
int zoom)
Creates a new instance of SOMegions
|
SOMRegion(Unit unit,
edu.cornell.cs.voronoi.IPnt pnt,
int clssIndex,
SOMLibClassInformation classInfo,
ArrayList<Color> paintList) |
SOMRegion(Unit unit,
SOMLibClassInformation classInfo,
ArrayList<Color> paintList,
int zoom)
Creates a new instance of SOMNode
|